Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKAAG
2GPF Chain:A ((1-72))
MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKAAG
General information:
TITO was launched using:
RESULT:
Template:
2GPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8829 for 407 contacts (-21.7/contact) +
2D Compatibility (PS) -7866 + (NN) -4020 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 3600
Total energy: -34315.0 ( -84.31 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2GPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPF-query.scw
PDB file :
Tito_Scwrl_2GPF.pdb
: