Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGG-S-DGR-VVFSKLEGGIWSAPTIVAQAG----GQDFRDVAGGTMP-SGRIVAASTVYE------------------TGEVKVYVSDDSGVTWVHKFTLARGGA-DY----NFAHGKSFQVG-----ARYVIPLYAATG-VNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNV-TAQNG-DSTDILVA-PSLSYIYSEGGTPHVVLLYTNRTTHFCYYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 1W8O Chain:A ((18-343)) | ------------------FPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRETGTIFN-FHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAASGEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGV---GMDENKTVELSDGRVLLNSRDSARSG-YRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDA--PAGSARAKVLLFSNAASQTSRSQGTIRMSCDD--G-QTWPVSKVF--QPGSMSYSTLTALPDGTYGLLYEPGT-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112266 for 2446 contacts (-45.9/contact) +
2D Compatibility (PS) -31766 + (NN) -17236 + (LL) 6732
1D Compatibility (HY) 2000 + (ID) 2600
Total energy: -155136.0 ( -63.42 by residue)
QMean score : 0.359
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