Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MLKLFATGLAASFLLLPPAQAAPPAPYGVQPHQ------QAVQRAGEQRQRQLQEQRQRFDEQRLQLQQDQLQRQQQNLQRQRQQRQMQDNLIRQQQLDQQRWRLEQDQRRLDSE--RRQLENR--RRQSQSPAIR-- |
| 2CM4 Chain:A ((6-150)) | CTGSEPVDAFQAFSEGKEAYVLVRSTDPKARDCLKGEPAGEKQDNTLPVMMTFKQGTDWASTDWTFTLDGAKVTATLGQ-LTQNREVVYDSQSHHCHVDKVEKEVPDYEMWMLDAGGLEVEVECCRQKLEELASGRNQMYPHLKDC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 45416 for 869 contacts (52.3/contact) +
2D Compatibility (PS) -12040 + (NN) 3212 + (LL) 176
1D Compatibility (HY) -2400 + (ID) 950
Total energy: 33414.0 ( 38.45 by residue)
QMean score : 0.053
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