Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIIKPRVRGFICVTTHPAGCEANVKQQIDYVEAKGPVVNGPKKVLVIGSSTGYGLAARITAAFGS-GADTLGVFFERPGSESKP--GTAGWYNSAAFEKFAHEKGLYARSINGDAFSDEVKRLTIETIKRDLGKVDLVVYSLAAPRRTHPKSGEVFSSTLKPIGKSVSFRGLDTDKEVIKDVVLEAASDQEVADTVAVMGGEDWQMWIDALLEADVLADGAKTTAFTYLGEKITH----DIYWNGSIGAAKKDLDQKVLGIRDKLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEQGTHEGCIEQVDGLYRESLYGAEPRLDEEGRLRADYKELQPEVQSRVEELWDKVTNENLYELTDFAGYKSEFLNLFGFEVAGVDYEQDVNPDVQIANLIQA |
| 3PXX Chain:A ((6-221)) | ------------------------------------GRVQDKVVLVTGGARGQGRS--HAVKLAEEGADIILFDICHDIETNEYPLATS--RDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL------------------------------------PVQAFADAFDVDF-VGVINTVHAAL--PYLTSGASIITTGSVAGLIAAAQPPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55811 for 1809 contacts (-30.9/contact) +
2D Compatibility (PS) -21813 + (NN) -7030 + (LL) 13200
1D Compatibility (HY) 1200 + (ID) 2100
Total energy: -72354.0 ( -40.00 by residue)
QMean score : 0.370
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