Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDA-AFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
2CN4 Chain:B ((1-171))
-AFSVNYDSSFGGYSIHDYLGQWASTFGDVNHTNGNVTD-ANSGGFYGGSLSGSQYAISSTANQVTAFVAGGNLTYTLFNEPAHTLYGQLDSLSFGDGLSGGDTSP-YSIQVPDVSFGGLNLSSLQAQGHDGVVHQVVYGLMSGDTGALETALNGILD--DYGLSVNSTFDQVAAA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65463 for 1053 contacts (-62.2/contact) +
2D Compatibility (PS) -18042 + (NN) -9191 + (LL) 2724
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -112522.0 ( -106.86 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_2CN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CN4-query.scw
PDB file :
Tito_Scwrl_2CN4.pdb
: