Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKTSHLIRIALPGALAAALLASQVSQAA-DLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRS--QIKDITDMERGATKLVTQYMRSG---RDGDLACALNWMSAW--ARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAHA--------EQSREIEDWFARLGTQVVRDWSGLPLKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSE----FKVAANQVDEQGFLPNELKRRQRALAYHNYALPP---LAMIAAFAQVNGVDLRQEN--------------------------HGALQRLAER----VMKGVD----DEETFEEKTGEDQDMTDL------KVDNKYAWLEPYCALYR-----CEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS------------------- |
| 4HU8 Chain:A ((3-452)) | NEITLTIGQQKDLASMVPAKFAGQELSWTSSDPETASVTDKGIVTALKFSSGGANLFLKAPATGEAIITVTAG-KQSHSVKVITTVKGKEDIEKLPPLKDHFKDYFLIGNIFNNRDVSGSMMDNDWLAHHYAILTPENHMKPSNLTNNRNETTGEITYTF---STADRMVNAAIAEGLKIHGHTLLWHQQIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIY--SWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADPNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRY---SWRSGG-LPLLFDADNKAKPAYYSFVRAREDYEAAKA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16515 for 2588 contacts (-6.4/contact) +
2D Compatibility (PS) -36540 + (NN) -1146 + (LL) 556
1D Compatibility (HY) -13200 + (ID) 3250
Total energy: -70095.0 ( -27.08 by residue)
QMean score : 0.113
|
|
|