Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
3T80 Chain:B ((4-158))
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL----------ADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLM--
General information:
TITO was launched using:
RESULT:
Template:
3T80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114351 for 1235 contacts (-92.6/contact) +
2D Compatibility (PS) -15966 + (NN) -9220 + (LL) 120
1D Compatibility (HY) -16400 + (ID) 5150
Total energy: -160967.0 ( -130.34 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_3T80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T80-query.scw
PDB file :
Tito_Scwrl_3T80.pdb
: