Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTDIFELQEKMQSAGLPV
1NJG Chain:A ((126-188))
------------------------------------------------RFKVYLIDEVHMLSRHSFNALLKTLEEP--P-E--HVKFLLATTD-P-QKLP----VTILSRCLQFHLKALDVE-----
General information:
TITO was launched using:
RESULT:
Template:
1NJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24750 for 322 contacts (-76.9/contact) +
2D Compatibility (PS) -6620 + (NN) -1286 + (LL) 5552
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -31154.0 ( -96.75 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1NJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NJG-query.scw
PDB file :
Tito_Scwrl_1NJG.pdb
: