Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRKVFSSQAYRHKVVLVSGGCSGIGRALALRFARAGARLAILDLDQAALDSLVQHLRDHLGGEALGLRCDVADADAVERAVALAVERFGGIDVLVNNAGITHRGT-FAETGLGVFRKVMAVNFFGAVHCTRAALPSLLER-RGQIVVLGSLTGFAPLLYRSAYNASKHALHGLFDTLRMELEGTGVSVTLACPGFTATDL----RKNALVGDGSVTRQPVQVLGSQVASPVEVAEAIFQGAARRRRLLVLSNVNWRARLLARFFPRLFEKLLVPRLSGLKPQP |
| 4FN4 Chain:B ((1-229)) | ------SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR-GMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTK--LMSLSSRLAEPEDIANVI---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171229 for 1932 contacts (-88.6/contact) +
2D Compatibility (PS) -23999 + (NN) -8837 + (LL) 4308
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -220007.0 ( -113.88 by residue)
QMean score : 0.569
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