Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFE-VLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG---VALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRN |
| 3KRF Chain:D ((7-295)) | ----YMLRKAKSVNKALEAA-VQMKEPL-KIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIV--RVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDH--LEFIHHHKTAALLQGSVVLGAILGGGKEE-EVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106688 for 2456 contacts (-43.4/contact) +
2D Compatibility (PS) -32325 + (NN) -34197 + (LL) 1616
1D Compatibility (HY) -26000 + (ID) 7350
Total energy: -204944.0 ( -83.45 by residue)
QMean score : 0.513
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