Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLLVLFCCLWLLPGVASAAPSVGEIRVVS-ETWTRYTQED----GRGVAWDLLRAVYEPAGVRLRIANEPYTRAVGLVLRGEADAWV-GAYRGEIDE--ALYPRWPYDVDPIAVLSLKDNP-PPPLEGLSRFRLSWMRGYAFARYFPT-----LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEM-LAGAGALAAEYRI--TD-----VTRLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE |
1LST Chain:A ((2-234)) | ---------------------LPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSD-KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPA--GKEYAFAGPSVKDKKYFGDGTGVGLRKD--DTELKAAFDKALTELRQDGTYDKMAKKYFDFN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105921 for 1678 contacts (-63.1/contact) +
2D Compatibility (PS) -23137 + (NN) -10280 + (LL) 3192
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -143746.0 ( -85.67 by residue)
QMean score : 0.387
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