Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
| 3NPF Chain:A ((86-144)) | --------------------------------------------IVVTSHYGFAYEKPDESSQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKSISQPEA--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16915 for 397 contacts (-42.6/contact) +
2D Compatibility (PS) -6652 + (NN) -6221 + (LL) 11488
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -20500.0 ( -51.64 by residue)
QMean score : 0.554
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