Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIES---GIDSDETLAAAVGS-----DAERIHRLMRLLVAFEIFQGD----TR----DGYANTPTSHLLR-DV-EGSFRDMVLFYGE-EFHAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFH-EIPRLL-DFR-GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMS--VLWDVHLFM-ACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 3P9C Chain:A ((18-364)) | -----EDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQ-------FPGVTHVGGDMFKEV-PSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184888 for 2419 contacts (-76.4/contact) +
2D Compatibility (PS) -34576 + (NN) -18506 + (LL) 480
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -257740.0 ( -106.55 by residue)
QMean score : 0.480
|
|
|