Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTP-----Q-QVVQGTVDELLSD-----IKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSD--DRASVNMEIRDSKGT-VYPVSYTMTNLAGGWKVR---NVIINGINIGKLFRDQFADTMQKNRN-DLEKTIAGWG-EVVAKAKETAKAEEAGAK----------------- |
| 5CW4 Chain:B ((3-272)) | -----DSDLLVTISGAALSLLFFENVRSVGNQMGFLLGEALEFIVETVKIHINVEAIVTCPLADLLHNHINKEKLKDFVRDKSKQVIGWFCFRRNTTNLTLTLKDKLLHKQFASHFSGVNGCKEDFFLTCLLNASTSETSGTHKFRHVFLRHNKRGMFEPISLKINNLGDDASRHSDYKPTPVRKSFTKLIESLNLDVAGLDSAMLIQKAAEHHLMSLIPKVCESDLEVAELEKQVHELKIKIATQQLAKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5633 for 1307 contacts (4.3/contact) +
2D Compatibility (PS) -21859 + (NN) -1899 + (LL) 788
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -17037.0 ( -13.04 by residue)
QMean score : 0.184
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