Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFDAQTIFENLVAR-EKLGST-GFGNGIAIPHCRLS-GCQSPISAVLHLDAPVDFDALDGAPVDLLFVLLVPEAATEEHL-ELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ
2OQT Chain:A ((5-150))
----QALIDNNSIRLGLSADTWQEAVRLAVQPLIDS--KAVTSAYYDAIIASTEKYGPYYVLMPGMAMPHAEA-LGVNRNAFALITLTKPVTFSD--GKEVSVLLTLAATDP--SIHTTVAIPQIVALFELDNAIERLVACQSPKEVLEMVEESKD--
General information:
TITO was launched using:
RESULT:
Template:
2OQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43454 for 1023 contacts (-42.5/contact) +
2D Compatibility (PS) -14350 + (NN) -2108 + (LL) 1108
1D Compatibility (HY) 1200 + (ID) 350
Total energy: -57954.0 ( -56.65 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_2OQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQT-query.scw
PDB file :
Tito_Scwrl_2OQT.pdb
: