Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQSSQLLPLGSLLLSFATPLAQADALHDQASALFKPIPEQVTELRGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQLGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE |
| 4AAL Chain:B ((18-338)) | -----------------------EDVMKRAQGLFKPIPAKPPVMKDNPASPSRVELGRMLFFDPRLSASHLISCNTCHNVGLGGTDILETSIGHGWQKGPRNSPTVLNAVYNIAQFWDGRAEDLAAQAKGPVQASVEMNNKPENLVATLKSIPGYPPLFRKAFPGQGDPVTFDNVAKAIEVFEATLVTPDAPFDKYLKGNRKAISSTAEQGLALFLDKGCAACHSGVNMGGTGYFPFGVREDPG-----VDDTGRYKVTSTAADKYVFRSPSLRNVAITMPYFHSGKVWKLKDAVKIMGSAQLGISITDADADKIVTFLNTLTGAQPKVMHPVLPPNSDDTPRP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91322 for 2603 contacts (-35.1/contact) +
2D Compatibility (PS) -34378 + (NN) -26248 + (LL) 2444
1D Compatibility (HY) -29200 + (ID) 9350
Total energy: -188054.0 ( -72.25 by residue)
QMean score : 0.513
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