Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQYVYTMHRVGKIVPPK-REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDTEIEGEARPMPG-INVGYLPQEPKLDP--QATVRDIVEEAVGQIKQAQARLDEVYAAYAEPDADFDALAAEQAKLEAILQASDGHNLERQLEVAADALRLPPW-DAKVEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEHFLHDF---PGTVVAITHDRYFLDNVAGWILELDRGHGIPFEGNYSGWLESKAARLAQEAKQEASHAKAMKAELEWVRQGAKGRQAKSKARLQRFEELQSQEFQKRSETNEIYIPAGPRLGDKVIELHNVTKGYGDRVLIDNLSLSIPKGAIVGVIGGNGAGKSTLFRMLTGKEQPDSGTIEIGETVQIASVDQSRDSLEGNKTVWEQVSDGFEQIKIGNYEVPSRSYVGRFNFKGADQQKFVKDLSGGERGRLHLALTLKQGGNVLLLDEPSNDLDVETLRALEEALLDF----PGAAIVISHDRWFLDRIATHILSYEDD--GKVTFFEGNYTEFE-------ADRKKRLGDAASQPHRVRYKKLA |
| 3J16 Chain:B ((81-586)) | --------AHVTHRY-SANSFKLHRLP-TPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQY--VDNI---PRAI----------KGPVQKVGELLK-LRMEKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSV-----YGVVTLPASVREGINI----FLDGHIPA--ENLR-----------FRTEALQFR---I---ADATEDL----QNDSASRAFSYPSLKKTQ-GDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIP--KLNVSMKPQKIAPK-FPGTVRQLFFKKIRGQF--LNPQFQTDVVKPLRIDD-IIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFE-GIPSKN-AHARAPESLLTGCNRFLKNLNVTFRR-DPNSFRPRINKL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110336 for 3942 contacts (-28.0/contact) +
2D Compatibility (PS) -52408 + (NN) -31718 + (LL) 4384
1D Compatibility (HY) -22800 + (ID) 4850
Total energy: -217728.0 ( -55.23 by residue)
QMean score : 0.387
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