Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
2EHD Chain:B ((4-226))
MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG---ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSV------------------------KLKPEDVAQAVLFALEMPGHAMVSEIELRP--------------
General information:
TITO was launched using:
RESULT:
Template:
2EHD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151692 for 1788 contacts (-84.8/contact) +
2D Compatibility (PS) -22514 + (NN) -5510 + (LL) 2484
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -197982.0 ( -110.73 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_2EHD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EHD-query.scw
PDB file :
Tito_Scwrl_2EHD.pdb
: