Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLLKFLWWTCVTLICGVLLSFSGAYLYLSPSLPSVEALRNVQLQIPLKVYSEDGKLISEFG-EMRRTPIRFADIPQDFIHALLSAEDDNFANHYGVDVKSLMRAAAQLLKSGHIQTGGSTITMQVAKNYFLTNERSFSRKINEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAAAQVYYGKPIKDLSLAEMAMIAGLPKAPSRYNPLVNPTRSTERRNWILERMLKLGFIDQQRYQAAVEEPINASYHV--Q-T-------PELNAPYIAEMARAEMVGRYG------SEAYTEGYKVITTVRSDLQNAASQSVRDGLIDYDQRHGYRGPETRLPGQTRDAWLKHLGQQRSIGGLEPAIVTQVEKSGIMVMTRDGKEEAVTWDSMKWARPFLSNNSMGPMPRQPADVAQAGDQIRVQRQEDGTLRFVQIPAAQSALISLDPKDGAIRSLVGGFSFEQ-SNYNRAIQAKRQPGSSFKPFI-YSAALDNG-FTAASLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIPLREALYKSRNMVSIRVLQGL----GIERAISYITKFGFQRDELPRNFSLALGT--ATVTPMEIAGAWSVFANGGYKVNPYVIERIESRDGQVLYQANPPRVPVEEQVAADAEDAGNPGDPEHPESAEGEGSIEAQQVAAKAQTTFEPTPAERIIDARTAYIMTSMLQDVIK-RGTGRRALALKRTDLAGKTGTTN--------------DSKDGWFSGYNSDYVTSVWVGFDQPETLGR----REYGGTVALPIWIRYMGFALKDKPMHTMAEPPGIV-SLRIDPVTGRSAAPGTPGAYFEMFKNEDTPPSVNELPPGSFPGSPLPDDEGAPIDLF |
| 2OLV Chain:A ((9-623)) | ---------------------------------------AKLQDPIPAKIYDKNGELVKTLDNGQRHEHVNLKDVPKSMKDAVLATEDNRFYEHGALDYKRLFGAIGK---------GASTLTQQVVKDAFLSQHKSIGRKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKDLNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAKKIDLKANLVNRTPEERQNIDTNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTNMDKDVQKTLQNDVDNGSFY-----------------------------------------------------------------------------------------------------------KNKDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQAT-DPHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQV-----DGSTFRNYDTKSHGTVSIYDALRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYE-GDIGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYD-H--------------------------------------------------TSHKAMSDYTAYMLAEMLKGTFKPYGSAYGH-GVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQYTMSVWMGFSKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRD-GEDFKRPSSVSGSIPSINVSGS----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230106 for 4783 contacts (-48.1/contact) +
2D Compatibility (PS) -60521 + (NN) -25464 + (LL) 12972
1D Compatibility (HY) -24400 + (ID) 7700
Total energy: -335219.0 ( -70.09 by residue)
QMean score : 0.465
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