Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIPSAIQLHKASKTLTLRYGEDSYDLPAEFLRVHSPSAEVQGHGNPVLQYGKLNVGLVGVEPAGQYALKLSFDDGHDSGLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
2AUW Chain:A ((10-40))
--------------------------------------------------------KLTAVEALAPYRLRTTWSTGE-VLEVDVGDIL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9242 for 143 contacts (-64.6/contact) +
2D Compatibility (PS) -3230 + (NN) 178 + (LL) 6016
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -8578.0 ( -59.99 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2AUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AUW-query.scw
PDB file :
Tito_Scwrl_2AUW.pdb
: