Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHY-QIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADCFP
2IXC Chain:B ((1-179))
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFED-----
General information:
TITO was launched using:
RESULT:
Template:
2IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80065 for 1368 contacts (-58.5/contact) +
2D Compatibility (PS) -18269 + (NN) -4210 + (LL) 116
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -119628.0 ( -87.45 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXC-query.scw
PDB file :
Tito_Scwrl_2IXC.pdb
: