Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAGEA
1RM6 Chain:C ((3-29))
----NILRLTLNGRAREDLVPDN--MLLLDYLR-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11208 for 116 contacts (-96.6/contact) +
2D Compatibility (PS) -3103 + (NN) -1379 + (LL) 5728
1D Compatibility (HY) -400 + (ID) 300
Total energy: -10662.0 ( -91.91 by residue)
QMean score : 0.711
(partial model without unconserved sides chains):
PDB file :
Tito_1RM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RM6-query.scw
PDB file :
Tito_Scwrl_1RM6.pdb
: