Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELLKLNRSVQGTGPGPGASLCRPGAPLLNSSSVGNLSCEPPRIRGAGTRELELAIRITLYAVIFLMSVGGNMLIIVVLGLSRRLRTVTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIFGT------VICKAVSYLMGVSVSVSTLSLVAIALERYSAICRPLQARVWQTRSHAARVIVATWLLSGLLMVPYPVYTVVQPV-GPRVLQCVHRWPSARVRQTWSVLLL---LLLFFIPGVVMAVAYGLISRELY-----LGLRFDGDSDS-------DSQSRVRN-------QGGLPGAVHQNGRCRPETGAVGEDSDGCYVQLPRS-RPALELTALTAPGPGSGSRPTQAKLLAK--------KRVVRMLLVIVVLFFLCWLPVYSANTWRAFDGPGAHRALSGAPISFIHLLSYASACVNPLVYCFMHRRFRQACLETCARCCPRPPRARPRALPDEDPPTPSIASLSRLSYTTISTLGPG |
| 4NC3 Chain:A ((43-406)) | -------------------------------------------------------------------TIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALL-----TIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET-VDNPNNITCV------LTKERFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRA------------------KDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVW-IGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222798 for 2089 contacts (-106.7/contact) +
2D Compatibility (PS) -29962 + (NN) 2679 + (LL) 5232
1D Compatibility (HY) -27600 + (ID) 4650
Total energy: -277099.0 ( -132.65 by residue)
QMean score : 0.195
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