Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEPQPPRPPASMALLGSQHSGAPSAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLG---NCAVMGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCAASRFFSSCFGIVSTLSVALISLDRYCAIVRPPRE-KIGRRRALQLLAGAWLTALGFSLPWELLGAPREL-AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRPVNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPSQGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEPVTAVTKQPKSEAGDTSL |
| 3C9L Chain:A ((44-310)) | ----------------------------------------------------------------------------------------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTT---LYTSLHGYFVFGPTG-----CNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAP-PLVGWSRYIPEGMQCSCGIDYYT-PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQK-----AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDF-GPIFMTIPA-FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDDE------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222501 for 2083 contacts (-106.8/contact) +
2D Compatibility (PS) -26473 + (NN) -10215 + (LL) 8876
1D Compatibility (HY) -26000 + (ID) 3450
Total energy: -279763.0 ( -134.31 by residue)
QMean score : 0.334
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