Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATSIYMINLAVFDLLLVLSLPFKMVLSQVQ-SPFP-SLCTLVECLYFVSMYGSVFTICFISMDRFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIY---SFHGKVEKYMCFHNM--SDDTWSAKVFFPLEVFGFLLPMGIMGFCCS------RSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIRAHRPSRVQLVLQDTTISRG |
4EA3 Chain:A ((124-405)) | ------------------LKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMK----TATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNL---RRITRLVLVVVAVFVGCWTPVQV-----FVLAQGLGVQPSSETAVA-ILRFCTALGYVNSCLNPILYAFLDENFKACFR------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269578 for 1958 contacts (-137.7/contact) +
2D Compatibility (PS) -26258 + (NN) -2 + (LL) 3772
1D Compatibility (HY) -23200 + (ID) 3600
Total energy: -318866.0 ( -162.85 by residue)
QMean score : 0.237
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