Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWNSSDANFSCYHESV-LGYRYVAVSWGVVVAVTGTVGNVLTLLALAIQPKLRTRFNLLIANLTLADLLYCTLLQPFSVDTYLHLHWRTGATFCRVFGLLLFASNSVSILTLCLIALGRYLLIAHPKLFPQVFSAKGIVLALVSTWVVGVASFAP--LWPIYILVPVV--CTCSFDRIRGRPYTTILMGIYFVLGLSSVGIFYCLIHRQVKRAAQALDQYKLRQASI----HSNHVARTDEAMPG-RFQELDSRLASGGPSEGISSEPVSAATTQTLEGDSSEVGDQINSKRAKQMAEKSPPEASAKAQPIKGARRAPDS---SSEFGKVTRMCFAVFLCFALSYIPFLLLNILDARVQAPRVVHMLAAN-LTW---LNGCINPVLYAAMNRQFRQAYGSILKRGPRSFHRLH |
4IAR Chain:A ((11-396)) | -----------YQDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQA------SECVVNTDHILYTVYSTV--GAFYFPTLLLIALYGRIYVEARSRIADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKAT--PPKLEDKSPDSPEMKDFRHGFDILVG-QIDDA-LKLANEGKVKEAQAAAEQLKTTRNAYIQKYLAARERKATKTLGIILGAFIVCWLPFFIISLVMPI-----WFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168476 for 2636 contacts (-63.9/contact) +
2D Compatibility (PS) -36853 + (NN) -5587 + (LL) 1808
1D Compatibility (HY) -22400 + (ID) 4450
Total energy: -235958.0 ( -89.51 by residue)
QMean score : 0.222
|
|
|