Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWYNNSAGPFLLTGFLGSEAVHYRISMSFFVIYFSVLFGNGTLLVLIWNDHSLHEPMYYFLAMLADTDLGMTFTTMPTVLGVLLLDQREIAHAACFTQSFIHSLAIVES-GILLVLAYDCFIAIRTPLRYNCILTNSRVMNIGLGV-LMRGFMSILPIILSLYCYPYCGSRALLHTFCLHQDVI----KLACADITFNHIYPIIQTSLTVFLDALIIIFSYILILKTVMGIASGQEEAKSLNTCVSHISCVLVFHITVMGLSFIHRFGKHAPHVVPITMSYVHFLFPPFVNPIIYSIKTKQIQRSIIRLFSGQSRA |
2RH1 Chain:A ((49-238)) | ------------------------------LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWY-------RA------THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVF---------QEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134297 for 1255 contacts (-107.0/contact) +
2D Compatibility (PS) -18650 + (NN) -891 + (LL) 2952
1D Compatibility (HY) -16800 + (ID) 2750
Total energy: -170436.0 ( -135.81 by residue)
QMean score : 0.111
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