Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNMTSIREFILLGFTDNPELQVVIFFFMLITYLLSVSGNMIIIMLTLSNIHLKTPMYFFLRNFSFLEISFTTVFIPRFLINIATGDTTISYNASMAQVFFLILLGSTEFFLLAVMSYDRYVAICKPLHYTTIMSNKVCNWLVISSWLAGFLIIFPPVIMGLQLDFCDSSTIDHFICDSSPMLLIAC--TDTQFLELMAFLLAVFTLMVTLALVVLSYTLILKTILK---------IPSAQQR---KKAFSTCSSHMIVVSVSYGSC----------IFMCVKTSAKEGMALSKGVAVLNTSVAPMLNPFIYTLRNQQVKQALREFTKKILSLNKQ |
3PWH Chain:A ((18-305)) | ---------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAI-AIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPM---LGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTN--SVVNPFIYAYRIREFRQTFRKIIRS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231194 for 1911 contacts (-121.0/contact) +
2D Compatibility (PS) -25362 + (NN) -2985 + (LL) 5176
1D Compatibility (HY) -22400 + (ID) 3150
Total energy: -279915.0 ( -146.48 by residue)
QMean score : 0.249
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