Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDNITSITEFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDIAYACNTVPRMLVNLLHPAKPISFAGRMMQ--TFLFSTFAVTECLLLVVMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKI-YHFFCEILAVLKLACADTHINEN-MVLAGAISGLVGPLSTIVVSYMCILCAILQIQSREVQRKAFCTCFSHLCVIGLFYGTAIIMYVGPRYGNPKEQKKYLLLFHSLFNPMLNPL--ICSLRNSEVKNTLKRVLGVERAL |
| 4MBS Chain:A ((34-283)) | ------------------------LLPPLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLL-TVPFW---AHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNII------FTRSQKEGLHYTCSS----HFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRM------KKYTCT------VCGYIY--------NPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173958 for 1620 contacts (-107.4/contact) +
2D Compatibility (PS) -24536 + (NN) -3316 + (LL) 4748
1D Compatibility (HY) -22000 + (ID) 3450
Total energy: -222512.0 ( -137.35 by residue)
QMean score : 0.197
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