Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMEIANVSSPEVFVLLGFSTRPSLETVLFIVVLSFYMVSILGNGIIILVSHTDVHLHTPMYFFLANLPFLDM-----SFTTSIVPQLLAN-LWGPQKTISYGGCVVQFYISHWLGATECVLLATMSYDRYAAICRPLHYTVIMHPQLCLGLALASWLGGLTTSMVGSTLTMLLPLCGNNCIDHFFCEMPLIMQLAC-VDTSLNEMEMYLASFV---FVV---LPLGLILVSYGHIARAVLKIRSAEGRRKAFNTCSSHVAVVSLFYGSIIFMYLQPAKST-----SHEQGKF------IALFYTVVTPALNPLIYTLRNTEVKSALRHMVLENCCGSAGKLAQI |
4A4M Chain:A ((58-326)) | ------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAP--------PLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNC---MVTTLCCGKN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180654 for 1750 contacts (-103.2/contact) +
2D Compatibility (PS) -24102 + (NN) 4396 + (LL) 5764
1D Compatibility (HY) -400 + (ID) 850
Total energy: -195846.0 ( -111.91 by residue)
QMean score : 0.077
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