Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGLGNESSLMDFILLGFSDHPRLEAVLFVFVLFFYLLTLVG---NFTIIIISYLDPPLHTPMYFFLSNLSLLDICFTTSLAPQTLVNLQRPKKTITYGGCVAQLYISLALGSTECILLADMALDRYIAVCKPLHYVVIMNPRLCQQLASISWLSGLASSLIHATFTLQLPLCGNHRLDHFICEVPALLKLACV-------DTTVNELVLFVVSVLFVVIPPALISISYGFITQAVLRIKSVEARHKAFST---CSSHLTVVII------------FYGTIIYVYLQPSDSYAQDQGKFISLFYTMVTPTLNPIIYTLRNKDMKEAL-RKLLSGKL
3CAP Chain:A ((43-325))--------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHA----IMGVAFTWVMALACAAPPLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMT-IPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN


General information:
TITO was launched using:
RESULT:

Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169111 for 1854 contacts (-91.2/contact) +
2D Compatibility (PS) -26406 + (NN) -7552 + (LL) 4656
1D Compatibility (HY) -22800 + (ID) 3300
Total energy: -224513.0 ( -121.10 by residue)
QMean score : 0.225

(partial model without unconserved sides chains):
PDB file : Tito_3CAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CAP-query.scw
PDB file : Tito_Scwrl_3CAP.pdb: