Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKSNSSVVSEFVLLGLCSSQKLQLFYFCFFSVLYTVIVLGNLLIILTVTSDTSLHSPMYFLLGNLSFVDICQASFATPKMIADFLSAHETISFSGCIAQIFFIHLFTGGEMVLLVSMAYDRYVAICKPLYYVVIMSRRTCTVLVMISWAVSLVHTLSQLSFTVNLPFCGPNVVDSFFCDLPRVTKLACL--DSYIIEILIVVNSGILSLSTFSLLVSSYIIILVTV--WLKSSAAMAKAFSTL------ASHIAVVILFFGPC--------IFIYVWP-FTISPLD-KFLAIFYTVFTPVLNPIIYTLRNRDMKAAVRKIV-NHYLRPRRISEMSLVVRTSFH |
4UG2 Chain:A ((21-309)) | --------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN---CGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL--------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218882 for 1909 contacts (-114.7/contact) +
2D Compatibility (PS) -25630 + (NN) -1559 + (LL) 5700
1D Compatibility (HY) -25600 + (ID) 3600
Total energy: -269571.0 ( -141.21 by residue)
QMean score : 0.226
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