Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESENRTVIREFILLGLTQSQDIQLLVFVLVLIFYFIILPGNFLIIFTIKSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSAKKIISYRGCITQLFFLHFLGGGEGLL-LVVMAFDRYIAICRPLHYPTVMNPRTCYAMMLALWLGGFVHSIIQVVLILRLPF-CGPNQLDNFFCDVPQVIKLAC------------TDTFVVELLMV-FNSGLMTL-LCFLGLLASYAVILCRIRGSSSEAKNKAMSTCITHIIVIFFMF------GPGIFIYTRPFRAF-PADKVVSLFHTVIFPLLNPVIYTLRNQEVKASMKKVFNKHIA |
| 4BEZ Chain:A ((56-318)) | ---------------------------------------PINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGDFTTTLYTSLHGYFVFGPTGCNLEGFFAT-LGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197373 for 1749 contacts (-112.8/contact) +
2D Compatibility (PS) -23791 + (NN) -5304 + (LL) 6720
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -222548.0 ( -127.24 by residue)
QMean score : 0.099
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