Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METQNLTVVTEFILLGLTQSQDAQLLVFVLVLIFYLIIL--PGNFLIIFTIKSDPGLTAPLYFFLGNLALLDASYSFIVVPRMLVDFLSEKKVISYRSCITQLFFLHFLGAGEMFLLVVMAFDRYIAICRPLHYSTIMNPRACYALSLVLWLGGFIHSIVQVALILHLPF-CGPNQLDNFFCDVPQVIKLAC------------TNTFVVELLMVSNSGLLSLLCFLGLLASYAVILCRIREHSSEGKSKAISTCTTHIIIIFLMF--------GPAIFIYTCPFQAF-PADKVVSLFHTVIFPLMNPVIYTLRNQEVKASMRKLLSQHMFC |
| 4BEZ Chain:A ((47-318)) | --------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGDFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215526 for 1845 contacts (-116.8/contact) +
2D Compatibility (PS) -24921 + (NN) -7749 + (LL) 5372
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -248174.0 ( -134.51 by residue)
QMean score : 0.180
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