Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENSTEVTEFILLGLTDDPNLQIPLLLAFLFIYLITLLG---NGGMMVIIHSDSHLHTPMYFFLSNLSLVDLGYSSAVAPKTVAALRSGDKAISYDGCAAQFFFFVGFATVECYLLASMAYDRHAAVCRPLHYTTTMTAGVCALLATGSYVSGFLNASIHAAGTFRLSF-CGSNEINHFFCDIPPLLALSC--------SDTRISKLVVFVAGFNVFFTLLVILISYFFICITIQRMHSAEGQKKVFSTCASHLTALSIFY------------GTIIFMYLQPNSSQSVDTDKIASVFYTVVIPMLNPLIYSLRNKEVKSALWKILNKLYPQY |
| 4A4M Chain:A ((39-318)) | ---------------------QFSMLAAYMF--LLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM----------------SNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPA-FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165325 for 1905 contacts (-86.8/contact) +
2D Compatibility (PS) -26281 + (NN) -7616 + (LL) 3528
1D Compatibility (HY) -6000 + (ID) 750
Total energy: -202444.0 ( -106.27 by residue)
QMean score : 0.162
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