Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEENHTMKNEFI----LTGFTDHPELK------TLLFVVFFAIYLITVVGNISLVALIFTHRRLHTPMYIFLGNLALVDSC-----CACAITPKMLENFFSENKRISLYECAVQFYFLCTVETADCFLLAAMAYDRYVAICNPLQYHI----MMSKKLCIQMTTGAFIAGNLHSMIHVGLVFRLVFCGSNHINHFYCDILPLYRLSCVDPYINELVLFIFSGSVQVFTIGSVLISYLYILLTIFKMKSKEGRAKAFSTCASHFLSVSLFYGSLFFMYVRPNLLEEGDKDIPAAILFTIVVPLLNPFIYSLRNREVISVLRKILMKK |
| 4YAY Chain:A ((91-266)) | -AEQLKTTRNAYIQKYLILNSSDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASV-----FLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLA-SLPAIIHRNVFFIITVCAFHYETLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLL---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104891 for 895 contacts (-117.2/contact) +
2D Compatibility (PS) -15992 + (NN) -5761 + (LL) 1108
1D Compatibility (HY) -15200 + (ID) 2300
Total energy: -143036.0 ( -159.82 by residue)
QMean score : 0.129
|
|
|