Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKAGNETQISEFLLLGFSEKQELQPFLFGLFLSM-YLVTVLGNLLIILAAISDSCLHTPMYFFLSNLSFVDICFASTMVPKMLVNIQTQSKVITYAGCITQMCFFVLFIVLDSLLLTVMAYDQFVAICHPLHYTVIMSPQLCGLLVLVSWIMSVLNSMLQSLVTLQLSFCTDLEIPHFFCELNEMIHLACSDTFVNNMVMHFAAVLLDGGPLVGILYSYCRIVSSIRAISSTQGKYKALSTCASHLSVVSIFYGTGLGVYLSSTMTQNLHSTAVASVMYTVVTPMLNPFIYSLRNKDIKGALTQFFRGKQ
4LDE Chain:A ((186-376))-----------------------------GIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFL----PIQMHWYRATHQEAINCYAEE----TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLC


General information:
TITO was launched using:
RESULT:

Template: 4LDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161324 for 1321 contacts (-122.1/contact) +
2D Compatibility (PS) -19197 + (NN) -3603 + (LL) 3584
1D Compatibility (HY) -14400 + (ID) 2400
Total energy: -197340.0 ( -149.39 by residue)
QMean score : 0.192

(partial model without unconserved sides chains):
PDB file : Tito_4LDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDE-query.scw
PDB file : Tito_Scwrl_4LDE.pdb: