Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGNQTHAQEFLLLGFSATSEIQFILFGLFLSMYLVTFT-GNLLIILAICSDSHLHTPMYFFLSNLSFADLCFTSTTVPKMLLNILTQNKFITYAGCLSQIFFFTSFG--CLDNLLLT--VMAYDRFVAVCHPLHYTVIMNPQLCGLLVLGSWCISVMGSLLETLTVLRLSFCTEMEIPHFFCDLLEVLKLACSDTFINN-------VVIYFATGVLGVISFTGIFFSYYKIVFSILRISSAGRKHKAFSTCGSHLSVVTLFYGTGFGVYLSSAATPSSRTSLVASVMYTM------VTPMLNPFIYSLRNTDMKRALGRLLSRATFFNGDITAGLS |
| 4LDO Chain:A ((176-461)) | ------------------AADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT--KTWTFGNFWCE--FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLP----IQMHWYRATHQEAINCYAEET----CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KF--ALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI----QDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201809 for 1828 contacts (-110.4/contact) +
2D Compatibility (PS) -25362 + (NN) 5340 + (LL) 3456
1D Compatibility (HY) -28400 + (ID) 3650
Total energy: -250425.0 ( -136.99 by residue)
QMean score : 0.178
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