Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFPSHDSQAFTSVDMEVGNCTILTEFILLGFSADSQWQPILFGVFLMLYLITLSGNMTLVILIRTDSHLHTPMYFFIGNLSFLDFWYTSVYTPKILASCVSEDKRISLAGCGAQLFFSC---VVAYTECYLLAAMAYDRHAAICNPLLYSGTMSTALCTGLVAGSY-----IG-----GFLNAIAHTANTFRLHFCGKNIIDHFFCDAPPLVKMSCTNTRVYEKVLLGVVGFTVLSSILAILISYVNILLAILRI------------HSASGRHKAFSTCASHLISVMLFYGSLL-------FMYSRPSSTYSLERDKVAALFYTVINPLLNPLIYSLRNKDIKEAFRKATQTIQPQT |
| 3PWH Chain:A ((12-305)) | --------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP--FAITISTGFCAACHGC---LFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPM------NYMVYFNFFA-----CVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -223659 for 1874 contacts (-119.3/contact) +
2D Compatibility (PS) -26026 + (NN) -7843 + (LL) 5056
1D Compatibility (HY) -18000 + (ID) 3550
Total energy: -274022.0 ( -146.22 by residue)
QMean score : 0.272
|
|
|