Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSPSAAWLLGAAILLAASLSCSGTIQGTNRSSKGRSLIGKVDGTSHVTGKGVTVETVFSVDEFSASVLTGKLTTVFLPI--------VYTIVFVVGLPSNGMALWVFLFRTKKKHPAVIYMANLALADLLSVIWFPLKIAYHIHGNNWIYGEALCNVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMGHSRKKANIAIGISLAIWLLILLVTIPLYVVKQTIFIPALNITTCHDVLPEQLLVGDMFNYFLSLAIGVFLF----PAFLTASAYVLMIRMLRSSAMDENS-EKKR--KRAIKLIVTVLAMYLICFTPSNLLLVVHYFLIKSQGQSHVYALYIVALC--LSTLNSCIDPFVYYFVSHDFRDHAKNALLCRSVRTVKQMQVSLTSKKHSRKSSSYSSSSTTVKTSY |
4EA3 Chain:A ((121-401)) | ------------------------------------------------------------------------------PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQ-GTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP------TSSKAQAVNVAIWALASVVGVPVAIMG-SAQVEDEEIECLVEIPTPQDYWGPVF------AICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSET---AVAILRFCTALGYVNSCLNPILYAFLDENFKACFR----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247605 for 1880 contacts (-131.7/contact) +
2D Compatibility (PS) -26378 + (NN) -8365 + (LL) 8664
1D Compatibility (HY) -28000 + (ID) 4300
Total energy: -305984.0 ( -162.76 by residue)
QMean score : 0.187
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