Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFIPIIFSSVVVVLFVIGNFANGFIALVNSIERVKRQKISFADQILTALAVSRVGLLWVLLLNWYSTVFNPAFYSVEVRTTAYNVWAVTGHFSNWLATSLSIFYLLKIANFSNLIFLHLKRRVKSVILVMLLGPLLFLACQLFVINMKEIVRTKEYEGNLTWKIKLRSAVYLSDATVTTLGNLVPFTLTLLCFLLLICSLCKHLKKMQLHGKGSQDPST---KVHI-KALQTVIFFLLLCAVYFLSIMISVWSFGSLENKPVFMFCKAIRFSYPS--IHPFILIWGNKKLKQTFLSVLRQVRYWVKGEKPSSP |
| 4UG2 Chain:A ((187-304)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVPLLLMLGVYLRIFLAARRQL-----------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72551 for 539 contacts (-134.6/contact) +
2D Compatibility (PS) -10298 + (NN) -6501 + (LL) 18996
1D Compatibility (HY) -11600 + (ID) 1350
Total energy: -83304.0 ( -154.55 by residue)
QMean score : 0.255
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