Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV---IFFIE-FIMCSANCAILLFINELELWLATWLGVFYCAKVASVRHPLFIWLKMRISKLVPWMILGSLLYVSMICVFHSKYAGFMVPYFLRKFFSQNATIQKEDT-LAIQIF-SFVAEFSVPLLIFLFAVLLLIFSLGRHTRQMRNTVA------------------------------G----------------------------------------------------------------------------------------------------------------------SRVPGRGAPISALLSILSFLILYFSHCMIKVFL-SSLK-F-H-IRRFIFLFFILVIGIYPSGHSLILILGNPKLKQNAKKFLLHSKCCQ |
| 3RZE Chain:A ((9-443)) | ------MPLVVVLSTICLVTVGLNLLVLYAVRSER---KLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQ---QPLRYL-KYRTKTRASATILGAWFLSFLWVIPILGWNH-----------RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229122 for 1946 contacts (-117.7/contact) +
2D Compatibility (PS) -27125 + (NN) -9074 + (LL) 2920
1D Compatibility (HY) -19600 + (ID) 1600
Total energy: -283601.0 ( -145.74 by residue)
QMean score : 0.302
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