Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSAGLGLLMLVAVVEFLIGLIGNGSLVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFPLFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFYHPPQGNSSIRYPFESWQYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSAGRRDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP
3UMM Chain:A ((1206-1244))
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGEGRVEVRDDAHLAALESKG---LVALRYV--DNFGKVTETYPANPNGSPNGITAVTTENGRVTIMMPHPERVFRTVANSWHPENWGEDSPWMR
General information:
TITO was launched using:
RESULT:
Template:
3UMM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3894 for 160 contacts (-24.3/contact) +
2D Compatibility (PS) -4201 + (NN) -1490 + (LL) 18988
1D Compatibility (HY) 2000 + (ID) 250
Total energy: 11153.0 ( 69.71 by residue)
QMean score : 0.127
(partial model without unconserved sides chains):
PDB file :
Tito_3UMM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UMM-query.scw
PDB file :
Tito_Scwrl_3UMM.pdb
: