Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFHVSKIPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLWRHTKQI-----KLYATGSRDPSTEVHVR------AIKTMTSFIFFFFLYYISSILMTFSYL--MTKY--KLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
| 3AYM Chain:A ((202-336)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -56259 for 609 contacts (-92.4/contact) +
2D Compatibility (PS) -11592 + (NN) 3962 + (LL) 17420
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -56919.0 ( -93.46 by residue)
QMean score : 0.141
|
|
|