Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIIS-PS-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF-CCTLRLPP-VKRGQSSVCHTALFLFAHELH-PQE--T-V-FHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYL--SAFTQ--------------------------------------------------------------------------------------------------------------------------------------------------------PACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI---NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 3EML Chain:A ((18-472)) | --------------------------------------IMGSSVYITVELAIAVLAILGNVLVCWAVWL---NSNLQNVTNYFVVSLAAADIAVGVLA-IPFAITIS-TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYN----GLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQ-----SQGCG-----EGQVACLFEDVVPMNYMVYFNFFACVLV----PLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197500 for 2042 contacts (-96.7/contact) +
2D Compatibility (PS) -28707 + (NN) -9678 + (LL) 7200
1D Compatibility (HY) -14800 + (ID) 1750
Total energy: -245235.0 ( -120.10 by residue)
QMean score : 0.235
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