Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KPVCGVDHYDLIERCYPTTTLTPPPPPSQQCCDIVKRTDL----------LCLCKYRFMLPTFGIDYARAI-EVPGKCGI--------PQPKC---
1BWO Chain:A ((1-90))
-IDCG-HVDSLVRPCLSYVQ-GGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG-VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28429 for 435 contacts (-65.4/contact) +
2D Compatibility (PS) -7508 + (NN) -9041 + (LL) 588
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -46990.0 ( -108.02 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: