Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIRTTQMQVDHKTSLIIDAVEKFGGEVRLVGGCVRDSILQRKVHDIDLATNLLPSQVIEALKFHNIKAIPTGLKHGTITAVLNQRSFEITTLRHDVKCDGRHAKVEFTDNWRADASRRDFTFNALYANKYGHIYDYFGGTQDLKARRLNFIGNAEDRIKEDYLRILRAFRFHAKICIGDMSDKILNVCKKHAHKIYNLSGERIRDEMFKLLEYDAPVPTLKSMQKSDVLQKIIPKEVKCEILSSAFLFGTDALVKLALLLRTTEKNDRLSLGEYVSKFLRLSNKQKKKLLFLLSNNIKTELTEKEQRKYISLLGKELYCDLVKVCGVESGANVDEYISLAQVLNIQKFPLSGDDLINIGYQPGKNLGRNLKLLRQHWEDSSYTLTKKELMLYAKSLL |
| 1MIV Chain:A ((11-203)) | -----------------IIQQLKQHGYDAYFVGGAVRDLLLGRPIGDVDIATSALPEDVMAIFP----KTIDVGSKHGTVVVVHKGKAYEVTTFKTDG-------SVTFVRSLEEDLKRRDFTMNAIAMDEYGTIIDPFGGREAIRRRIIRTVGEAEKRFREDALRMMRAVRFVSELGFALAPDTEQAIV-QNAPLLAHISVERMTMEMEKLLGGPFAARALPLLAETGLNAYLPGLAGKEKQLRLAAAYRWPWLAAREERWALLCHALGVQESRPFLRAWKLPNKVVDEAGAILTALADIPRPEAWTNEQLFSAGLERALSVETVRAAFTGAPPGPWHEKLRRRFASLPIKTKGELAVNGKDVIEWVGKPAGPWVKEALDAIWRAVVNGEVENEKERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84414 for 1441 contacts (-58.6/contact) +
2D Compatibility (PS) -19018 + (NN) 3323 + (LL) 2036
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -114773.0 ( -79.65 by residue)
QMean score : 0.399
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