Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLLKKFNEQQMQVLAKEVPEFRPGDDLKVTFKVVDSTSERIQIFEGVCISKRNRGLHSSFAVRKVSHGESIVSQFFIYSPALVSVQVTRRGKVRRAKLYYLCKLFGKAARIKERATYKNNKSN
2J28 Chain:P ((1-112))-SNIIKQLEQEQMK---QDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN-------


General information:
TITO was launched using:
RESULT:

Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12969 for 700 contacts (18.5/contact) +
2D Compatibility (PS) -11196 + (NN) 1960 + (LL) 976
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -7091.0 ( -10.13 by residue)
QMean score : 0.035

(partial model without unconserved sides chains):
PDB file : Tito_2J28.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J28-query.scw
PDB file : Tito_Scwrl_2J28.pdb: