Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY
3RJL Chain:A ((204-235))
---------------------------------VLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVV
General information:
TITO was launched using:
RESULT:
Template:
3RJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21084 for 146 contacts (-144.4/contact) +
2D Compatibility (PS) -3073 + (NN) 2119 + (LL) 2828
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -21910.0 ( -150.07 by residue)
QMean score : 0.118
(partial model without unconserved sides chains):
PDB file :
Tito_3RJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RJL-query.scw
PDB file :
Tito_Scwrl_3RJL.pdb
: