Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQKQYNLGKSLKCKKKSLLTKVKNLLRFQEEKKSVDEKSRDIAKPREIKSEKSIDNKKNELVIAKIY
2L3I Chain:A ((5-11))
--------PKSWKCKAFKQRVLKRLLAMLRQHAF----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 471 for 14 contacts (33.6/contact) +
2D Compatibility (PS) -749 + (NN) -57 + (LL) 3480
1D Compatibility (HY) -800 + (ID) 250
Total energy: 2095.0 ( 149.64 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_2L3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3I-query.scw
PDB file :
Tito_Scwrl_2L3I.pdb
: